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In Silico
In Silico
Differences in LexA regulon structure among Proteobacteria through in vivo assisted comparative genomics
Algorithms / Genomics / Computational Biology / Comparative Genomics / DNA damage / Biological Sciences / Environmental Sciences / Cell Viability / Nucleic Acids / Alphaproteobacteria / Experimental Validation / Base Sequence / In Silico / Biological Sciences / Environmental Sciences / Cell Viability / Nucleic Acids / Alphaproteobacteria / Experimental Validation / Base Sequence / In Silico
Functional characterization of alternatively spliced human SECISBP2 transcript variants
Molecular Evolution / Neurochemistry / Immunohistochemistry / Biological Sciences / Phylogeny / Cell line / Environmental Sciences / Humans / Kidney / Ultraviolet / Animals / Muscles / Alternative splicing / Nucleic Acids / Serotonin Receptors / RNA-binding proteins / Insertion sequence / Antisense Oligonucleotide Drugs / Amino Acid Profile / Transfection / Alternative Splicing / Protein isoforms / Amino Acid Sequence / In Silico / Protein Binding / Neurosciences / Full Length Movies / Protein Biosynthesis / Gene Expression Regulation / Mitochondrial Proteins / Molecular Sequence Data / Cell Membrane / Cell line / Environmental Sciences / Humans / Kidney / Ultraviolet / Animals / Muscles / Alternative splicing / Nucleic Acids / Serotonin Receptors / RNA-binding proteins / Insertion sequence / Antisense Oligonucleotide Drugs / Amino Acid Profile / Transfection / Alternative Splicing / Protein isoforms / Amino Acid Sequence / In Silico / Protein Binding / Neurosciences / Full Length Movies / Protein Biosynthesis / Gene Expression Regulation / Mitochondrial Proteins / Molecular Sequence Data / Cell Membrane
RISCI - Repeat Induced Sequence Changes Identifier: a comprehensive, comparative genomics-based, in silico subtractive hybridization pipeline to identify repeat induced sequence changes in closely related genomes
Bioinformatics / Data Mining / Genomics / Polymorphism / Comparative Genomics / Biological Sciences / Humans / Sequence alignment / Mycobacterium tuberculosis / Mathematical Sciences / Animals / BMC Bioinformatics / Human Genome / Pan troglodytes / Genome sequence / In Silico / Full Length Movies / Comparative Genomic Hybridization / Biological Sciences / Humans / Sequence alignment / Mycobacterium tuberculosis / Mathematical Sciences / Animals / BMC Bioinformatics / Human Genome / Pan troglodytes / Genome sequence / In Silico / Full Length Movies / Comparative Genomic Hybridization
Ancestral Sequence Reconstruction in Primate Mitochondrial DNA: Compositional Bias and Effect on Functional Inference
Evolutionary Biology / Genetics / Molecular Biology / Molecular Evolution / Mitochondria / Primates / Phylogeny / Mitochondrial DNA / Humans / Maximum Likelihood / Animals / Molecular biology and evolution / Secondary Structure / Cytochrome B / Protein Function Prediction / Amino Acid Sequence / In Silico / Bayes Theorem / Likelihood Functions / Nucleotides / Biochemistry and cell biology / Functional Properties / Primates / Phylogeny / Mitochondrial DNA / Humans / Maximum Likelihood / Animals / Molecular biology and evolution / Secondary Structure / Cytochrome B / Protein Function Prediction / Amino Acid Sequence / In Silico / Bayes Theorem / Likelihood Functions / Nucleotides / Biochemistry and cell biology / Functional Properties
Comprehensive identification and characterization of diallelic insertion-deletion polymorphisms in 330 human candidate genes
Polymorphism / Computational Biology / Population Genetics / Systems Biology / Calcium / System Biology / Gene expression / Low Frequency / Biological Sciences / Molecular / Association study / Cercopithecus aethiops / Cell line / Humans / Genetic Testing / Microarray / Mice / Animals / Human Molecular Genetics / Gene Network / Genome / Genes / Integrated Approach / Human Genome / Myocardium / Correlation Analysis / Linkage Disequilibrium / Base Sequence / In Silico / Subcellular Fractions / Calcium Binding Protein / Protein Transport / Allele Frequency / Microarray Data / DNA mutational analysis / System Biology / Gene expression / Low Frequency / Biological Sciences / Molecular / Association study / Cercopithecus aethiops / Cell line / Humans / Genetic Testing / Microarray / Mice / Animals / Human Molecular Genetics / Gene Network / Genome / Genes / Integrated Approach / Human Genome / Myocardium / Correlation Analysis / Linkage Disequilibrium / Base Sequence / In Silico / Subcellular Fractions / Calcium Binding Protein / Protein Transport / Allele Frequency / Microarray Data / DNA mutational analysis
Los modelos in silico, una herramienta para el conocimiento farmacológico
In Silico
Ancestral sequence reconstruction in primate mitochondrial DNA: compositional bias and effect on functional inference
Evolutionary Biology / Genetics / Molecular Biology / Molecular Evolution / Mitochondria / Primates / Phylogeny / Mitochondrial DNA / Humans / Maximum Likelihood / Animals / Molecular biology and evolution / Secondary Structure / Cytochrome B / Protein Function Prediction / Amino Acid Sequence / In Silico / Bayes Theorem / Likelihood Functions / Nucleotides / Biochemistry and cell biology / Functional Properties / Primates / Phylogeny / Mitochondrial DNA / Humans / Maximum Likelihood / Animals / Molecular biology and evolution / Secondary Structure / Cytochrome B / Protein Function Prediction / Amino Acid Sequence / In Silico / Bayes Theorem / Likelihood Functions / Nucleotides / Biochemistry and cell biology / Functional Properties
Structural insights regarding an insecticidal Talisia esculenta protein and its biotechnological potential for Diatraea saccharalis larval control
Physiology / Biotechnology / Diet / Lepidoptera / Homology Modeling / Insecticides / Phylogeny / Sequence alignment / Animals / Trypsin / Sodium Dodecyl Sulfate-Polyacrylamide Gel Electrophoresis / Larva / Amino Acid Sequence / In Silico / Larval Development / Binding Site / Biochemistry and cell biology / Molecular Sequence Data / Insecticides / Phylogeny / Sequence alignment / Animals / Trypsin / Sodium Dodecyl Sulfate-Polyacrylamide Gel Electrophoresis / Larva / Amino Acid Sequence / In Silico / Larval Development / Binding Site / Biochemistry and cell biology / Molecular Sequence Data
In silico detection of tRNA sequence features characteristic to aminoacyl-tRNA synthetase class membership
Algorithms / Computational Biology / Sequence Analysis / Discrete Mathematics / Biological Sciences / Saccharomyces cerevisiae / Environmental Sciences / Humans / Sequence alignment / Animals / Nucleic Acids / Enzyme / In Silico / aminoacyl-tRNA synthetase / Nucleotides / Saccharomyces cerevisiae / Environmental Sciences / Humans / Sequence alignment / Animals / Nucleic Acids / Enzyme / In Silico / aminoacyl-tRNA synthetase / Nucleotides
Antibacterial activity of methanol extract of Macaranga denticulata leaves and in silico PASS prediction for its six secondary metabolites
Antibacterial activity / In Silico / Macaranga Denticulata / PASS prediction
In silico approaches to study mass and energy flows in microbial consortia: a syntrophic case study
Network Analysis / A Priori Knowledge / Energy Metabolism / Nitrogen Fixation / Yellowstone National Park / Circadian Rhythm / Case Study / Wyoming / Sulfate reducing Bacteria / Enzyme / Ecosystem / Pathway Analysis / Synechococcus / Relative Abundance / Species Specificity / In Silico / Microbial community / Circadian Rhythm / Case Study / Wyoming / Sulfate reducing Bacteria / Enzyme / Ecosystem / Pathway Analysis / Synechococcus / Relative Abundance / Species Specificity / In Silico / Microbial community
Comparison of Expression Profiles in Ovarian Epithelium In Vivo and Ovarian Cancer Identifies Novel Candidate Genes Involved in Disease Pathogenesis
Immunohistochemistry / Ovarian Cancer / Multidisciplinary / Humans / Mutation / Mice / Female / Animals / Genetic Association Studies / Gene Dosage / PLoS one / Aged / Middle Aged / Epithelium / Adult / Chromosome segregation / Reproducibility of Results / In Silico / Overall Survival / Adenocarcinoma / Gene expression profiling / Cohort Studies / Estrous cycle / Ovarian Surface Epithelium / Mice / Female / Animals / Genetic Association Studies / Gene Dosage / PLoS one / Aged / Middle Aged / Epithelium / Adult / Chromosome segregation / Reproducibility of Results / In Silico / Overall Survival / Adenocarcinoma / Gene expression profiling / Cohort Studies / Estrous cycle / Ovarian Surface Epithelium
Making sense of quorum sensing in lactobacilli: a special focus on Lactobacillus plantarum WCFS1
Genetics / Microbiology / Ecological Niche Modeling / Multidisciplinary / Protein Kinases / Bacteriocins / Lactobacillus / Quorum Sensing / Peptides / Cyclic peptides / Lactobacillus Plantarum / Protein Kinase / Amino Acid Sequence / In Silico / Bacteriocins / Lactobacillus / Quorum Sensing / Peptides / Cyclic peptides / Lactobacillus Plantarum / Protein Kinase / Amino Acid Sequence / In Silico
N-terminal amphipathic helix as a trigger of hemolytic activity in antimicrobial peptides: A case study in latarcins
Biochemistry / Microbiology / Immunology / Molecular Biology / Computational Biology / Protein Engineering / Molecular modeling / Mutation / EC / Case Study / Animals / Antimicrobial Peptide / AMPs / Antimicrobial Cationic Peptides / Protein Secondary Structure Prediction / Cytotoxic Activity / Ec / Amino Acid Sequence / In Silico / Biochemistry and cell biology / Hemolysis / Proof of Concept / Protein Engineering / Molecular modeling / Mutation / EC / Case Study / Animals / Antimicrobial Peptide / AMPs / Antimicrobial Cationic Peptides / Protein Secondary Structure Prediction / Cytotoxic Activity / Ec / Amino Acid Sequence / In Silico / Biochemistry and cell biology / Hemolysis / Proof of Concept
Theoretical investigation of action potential duration dependence on extracellular Ca2+ in human cardiomyocytes
Calcium / Molecular / Humans / Computer Model / Potassium / Ion Transport / In Silico / Action Potentials / Heart Ventricles / Action Potential Duration / Ion Transport / In Silico / Action Potentials / Heart Ventricles / Action Potential Duration
Candidatus Cloacamonas Acidaminovorans\": Genome Sequence Reconstruction Provides a First Glimpse of a New Bacterial Division
Genomics / Bacteriology / Biological Sciences / Anaerobic Digestion / Bacteria / Polymerase Chain Reaction / Amino Acid Profile / Proteome analysis / Genome sequence / In Silico / Polymerase Chain Reaction / Amino Acid Profile / Proteome analysis / Genome sequence / In Silico
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